BioBrick
Synthetic Biology · Molecular Biology · Biotechnology
Say it: BY-oh-brik
A BioBrick is a standardized piece of DNA, such as a promoter or gene, flanked by fixed sequences so it can be joined to other parts in a repeatable way.
Also: BioBricks, standard biological part
Definition
What is a BioBrick?
A BioBrick is a DNA part built to a shared technical standard so that it can be combined with other parts like a building block. Each part does one defined job, for example switching a gene on, helping ribosomes bind, coding for a protein or ending transcription, and is kept in plasmids grown in E. coli. Tom Knight at MIT proposed the standard in the early 2000s, and parts are catalogued under unique numbers in the Registry of Standard Biological Parts.
In the original standard, every part has a prefix in front carrying sites for the restriction enzymes EcoRI and XbaI, and a suffix behind carrying sites for SpeI and PstI; the part itself must not contain those sites. XbaI and SpeI leave matching sticky ends, so two parts can be cut and ligated together, leaving a short eight-base scar, and the joined product is again a BioBrick with the same prefix and suffix. That property lets designers build larger devices one step at a time.
Students meet BioBricks through the iGEM competition, where teams design and share new parts. Because the original scar shifts the reading frame, later standards were written to allow protein fusions.
Word parts
Where does the word “BioBrick” come from?
- bio-
- lifeGreek bios
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Where you'll meet it
Related
Terms that go with it
- Synthetic biologySynthetic biology applies engineering design to living systems, building new genetic parts, circuits and genomes so that organisms can do useful jobs.
- PlasmidA plasmid is a small, usually circular DNA molecule that copies itself independently of the main chromosome, found mostly in bacteria.
- Restriction enzymeA restriction enzyme is a bacterial protein that cuts DNA at a specific short sequence, making it a basic tool for cutting and joining DNA.
- Molecular cloningMolecular cloning is a set of laboratory methods for inserting a specific DNA fragment into a vector and copying it many times inside host cells.
- Recombinant DNARecombinant DNA is DNA made in the laboratory by joining pieces of DNA from different sources, often different species, into one molecule.
Sources
Checked against
Written for biofideX in plain words, after checking these references:
- OpenWetWare: The BioBricks Foundation, Standards/Technical/Formats
- Shetty, Endy and Knight (2008), Engineering BioBrick vectors from BioBrick parts, Journal of Biological Engineering
- Cai, Wilson and Peccoud (2010), GenoCAD for iGEM, Nucleic Acids Research
- MIT DSpace: Knight (2003), Idempotent Vector Design for Standard Assembly of Biobricks
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