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Hemocytometer Calculator

Turn the cells you counted on a hemocytometer (haemocytometer) into cells per mL, viability, total cells, and the volume of suspension to seed.

Calculator

Count your cells

Squares you counted
squares
fold

2 after mixing 1:1 with trypan blue, 1 if undiluted.

cells

All squares together. Without a stain, count every cell here.

Optional
cells

The blue ones, for viability.

Optional

For the total number of cells.

Optional
cells

For the volume of suspension to use.

Enter the squares counted, live cells counted and dilution factor to see the cells per mL.

Worked example

Four large squares, 1:1 in trypan blue

  1. 01live cells: 52 + 47 + 55 + 46 = 200; dead: 10
  2. 02(200 ÷ 4) × 2 × 10⁴ = 10⁶ live cells/mL
  3. 03viability = 200 ÷ 210 = 95.2%

10⁶ live cells/mL, at 95.2% viability.

How it works

The reasoning behind it

A hemocytometer is a slide with a counting grid and a chamber of known depth, 0.1 mm. The grid's large squares are 1 mm across, so each holds 0.1 µL of your sample.

Counting the cells over several squares and averaging gives the cells in 0.1 µL. Multiplying by 10⁴ turns that into cells per mL, and multiplying by the dilution factor undoes any dilution made before loading.

Trypan blue gets into cells whose membranes are damaged, so blue cells are counted as dead. Viability is the live cells as a percentage of all the cells counted.

Questions

Frequently asked

Why multiply by 10,000 in a hemocytometer count?

One large square holds 0.1 µL, which is 10⁻⁴ mL. The cells over one square are the cells in 10⁻⁴ mL, so multiplying by 10⁴ gives cells per mL.

How do I calculate cell viability?

Divide the live (unstained) cells by all the cells counted, live and dead, and multiply by 100. 200 live and 10 dead cells is 200 ÷ 210 × 100 = 95.2%.

How much cell suspension do I need to seed a flask?

Divide the number of cells you want by the live cells per mL. To seed 5 × 10⁵ cells from a suspension of 10⁶ cells/mL, use 0.5 mL.

Which squares should I count?

For cultured cells, count the four large corner squares, and the centre one as well if you like. For small, dense cells such as red blood cells, count the small squares in the centre grid and choose small squares in the calculator.